Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 AL035252.4-201ENST00000624174 288 ntBASIC31.59■■■□□ 2.65
HMGXB3Q12766 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC31.59■■■□□ 2.65
HMGXB3Q12766 AC012645.4-201ENST00000610691 1061 ntBASIC31.59■■■□□ 2.65
HMGXB3Q12766 AF228730.6-201ENST00000641497 218 ntBASIC31.59■■■□□ 2.65
HMGXB3Q12766 AC084121.3-201ENST00000641716 218 ntBASIC31.59■■■□□ 2.65
HMGXB3Q12766 AC105233.6-201ENST00000642093 218 ntBASIC31.59■■■□□ 2.65
HMGXB3Q12766 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
HMGXB3Q12766 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HMGXB3Q12766 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
HMGXB3Q12766 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC31.58■■■□□ 2.65
HMGXB3Q12766 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
HMGXB3Q12766 AC087641.1-201ENST00000557561 1021 ntBASIC31.58■■■□□ 2.65
HMGXB3Q12766 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
HMGXB3Q12766 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
HMGXB3Q12766 PMS2P4-201ENST00000412466 1052 ntBASIC31.57■■■□□ 2.64
HMGXB3Q12766 AC190387.1-201ENST00000551683 408 ntBASIC31.57■■■□□ 2.64
HMGXB3Q12766 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC31.57■■■□□ 2.64
HMGXB3Q12766 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC31.57■■■□□ 2.64
HMGXB3Q12766 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HMGXB3Q12766 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HMGXB3Q12766 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HMGXB3Q12766 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HMGXB3Q12766 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
HMGXB3Q12766 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 AP002414.1-201ENST00000391405 1147 ntBASIC31.56■■■□□ 2.64
HMGXB3Q12766 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SLBP-205ENST00000488267 987 ntTSL 2 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC31.56■■■□□ 2.64
HMGXB3Q12766 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HMGXB3Q12766 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 METTL26-204ENST00000397665 558 ntTSL 2 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HMGXB3Q12766 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.55■■■□□ 2.64
HMGXB3Q12766 YTHDF3-AS1-201ENST00000603538 718 ntBASIC31.54■■■□□ 2.64
HMGXB3Q12766 AL499627.1-201ENST00000569373 2188 ntBASIC31.54■■■□□ 2.64
HMGXB3Q12766 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HMGXB3Q12766 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HMGXB3Q12766 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HMGXB3Q12766 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 AC003669.1-201ENST00000334569 611 ntBASIC31.54■■■□□ 2.64
HMGXB3Q12766 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HMGXB3Q12766 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 TK1-204ENST00000590430 683 ntTSL 3 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
HMGXB3Q12766 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGXB3Q12766 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 FAM86GP-201ENST00000448322 971 ntBASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms