Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL20P78556 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCL20P78556 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CCL20P78556 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL20P78556 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL20P78556 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL20P78556 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL20P78556 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL20P78556 OR10C1-204ENST00000622521 1039 ntBASIC14.26□□□□□ -0.13
CCL20P78556 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 MST1L-201ENST00000442552 2185 ntBASIC14.26□□□□□ -0.13
CCL20P78556 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCL20P78556 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL20P78556 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL20P78556 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 AL603756.1-201ENST00000606511 2163 ntBASIC14.25□□□□□ -0.13
CCL20P78556 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 KRT18P41-201ENST00000518924 1277 ntBASIC14.25□□□□□ -0.13
CCL20P78556 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL20P78556 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL20P78556 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CCL20P78556 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL20P78556 AC079328.2-201ENST00000561241 3354 ntBASIC14.25□□□□□ -0.13
CCL20P78556 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL20P78556 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCL20P78556 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL20P78556 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL20P78556 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms