Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.16■□□□□ 0.34
GABREP78334 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.16■□□□□ 0.34
GABREP78334 AC040169.1-201ENST00000565382 521 ntBASIC17.16■□□□□ 0.34
GABREP78334 AP001160.2-201ENST00000596071 487 ntBASIC17.16■□□□□ 0.34
GABREP78334 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.16■□□□□ 0.34
GABREP78334 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
GABREP78334 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GABREP78334 AL032819.2-201ENST00000624543 2162 ntBASIC17.16■□□□□ 0.34
GABREP78334 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.16■□□□□ 0.34
GABREP78334 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABREP78334 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 YBX2P1-201ENST00000394192 760 ntBASIC17.15■□□□□ 0.34
GABREP78334 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.15■□□□□ 0.34
GABREP78334 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.15■□□□□ 0.34
GABREP78334 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.15■□□□□ 0.34
GABREP78334 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 AC025062.2-201ENST00000605477 670 ntBASIC17.15■□□□□ 0.34
GABREP78334 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.15■□□□□ 0.34
GABREP78334 AC008735.5-201ENST00000623544 497 ntBASIC17.15■□□□□ 0.34
GABREP78334 AL139288.1-201ENST00000623748 933 ntBASIC17.15■□□□□ 0.34
GABREP78334 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GABREP78334 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABREP78334 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.15■□□□□ 0.34
GABREP78334 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
GABREP78334 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GABREP78334 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GABREP78334 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 AC018445.3-201ENST00000624177 1945 ntBASIC17.14■□□□□ 0.33
GABREP78334 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 AC004967.1-201ENST00000453589 447 ntBASIC17.14■□□□□ 0.33
GABREP78334 RNA5SP416-201ENST00000516838 111 ntBASIC17.14■□□□□ 0.33
GABREP78334 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.14■□□□□ 0.33
GABREP78334 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.14■□□□□ 0.33
GABREP78334 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.14■□□□□ 0.33
GABREP78334 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.14■□□□□ 0.33
GABREP78334 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.14■□□□□ 0.33
GABREP78334 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABREP78334 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.14■□□□□ 0.33
GABREP78334 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GABREP78334 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GABREP78334 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GABREP78334 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABREP78334 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms