Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.65■□□□□ 0.42
YBX1P67809 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
YBX1P67809 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YBX1P67809 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
YBX1P67809 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
YBX1P67809 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YBX1P67809 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YBX1P67809 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
YBX1P67809 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.64■□□□□ 0.42
YBX1P67809 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
YBX1P67809 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
YBX1P67809 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
YBX1P67809 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 AC138028.4-201ENST00000564984 1845 ntBASIC17.64■□□□□ 0.41
YBX1P67809 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.64■□□□□ 0.41
YBX1P67809 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.64■□□□□ 0.41
YBX1P67809 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.64■□□□□ 0.41
YBX1P67809 AC087388.1-201ENST00000571370 1112 ntBASIC17.64■□□□□ 0.41
YBX1P67809 AC080080.1-201ENST00000625121 2420 ntBASIC17.64■□□□□ 0.41
YBX1P67809 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
YBX1P67809 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
YBX1P67809 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.64■□□□□ 0.41
YBX1P67809 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.64■□□□□ 0.41
YBX1P67809 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YBX1P67809 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.64■□□□□ 0.41
YBX1P67809 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
YBX1P67809 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
YBX1P67809 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YBX1P67809 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 ARMC10P1-201ENST00000313754 855 ntBASIC17.63■□□□□ 0.41
YBX1P67809 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.63■□□□□ 0.41
YBX1P67809 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
YBX1P67809 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.63■□□□□ 0.41
YBX1P67809 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.63■□□□□ 0.41
YBX1P67809 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
YBX1P67809 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
YBX1P67809 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 AC106820.2-201ENST00000563775 3264 ntBASIC17.63■□□□□ 0.41
YBX1P67809 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.63■□□□□ 0.41
YBX1P67809 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.63■□□□□ 0.41
YBX1P67809 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.63■□□□□ 0.41
YBX1P67809 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YBX1P67809 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
YBX1P67809 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
YBX1P67809 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
YBX1P67809 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.62■□□□□ 0.41
YBX1P67809 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.62■□□□□ 0.41
YBX1P67809 LINC01238-205ENST00000567549 1107 ntBASIC17.62■□□□□ 0.41
YBX1P67809 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.62■□□□□ 0.41
YBX1P67809 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
YBX1P67809 PP12613-201ENST00000424958 2230 ntBASIC17.62■□□□□ 0.41
YBX1P67809 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YBX1P67809 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.61■□□□□ 0.41
YBX1P67809 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YBX1P67809 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
YBX1P67809 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
YBX1P67809 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
YBX1P67809 PCDHA12-202ENST00000613593 2588 ntBASIC17.61■□□□□ 0.41
YBX1P67809 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
YBX1P67809 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YBX1P67809 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
YBX1P67809 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
YBX1P67809 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms