Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.08■□□□□ 0.32
TRA2BP62995 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 HBZP1-201ENST00000354915 429 ntBASIC17.08■□□□□ 0.32
TRA2BP62995 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 AC092647.4-201ENST00000457211 535 ntBASIC17.08■□□□□ 0.32
TRA2BP62995 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.08■□□□□ 0.32
TRA2BP62995 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.08■□□□□ 0.32
TRA2BP62995 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TRA2BP62995 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRA2BP62995 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
TRA2BP62995 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRA2BP62995 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.08■□□□□ 0.32
TRA2BP62995 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.07■□□□□ 0.32
TRA2BP62995 AC006116.8-202ENST00000587620 1550 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TRA2BP62995 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 AC104076.2-201ENST00000448912 469 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 KRT18P38-201ENST00000449496 1282 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 AC092597.1-201ENST00000487352 616 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 AC063952.2-201ENST00000498792 1227 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 LINC01238-205ENST00000567549 1107 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.07■□□□□ 0.32
TRA2BP62995 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.07■□□□□ 0.32
TRA2BP62995 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.07■□□□□ 0.32
TRA2BP62995 AL133373.2-201ENST00000623187 2828 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.07■□□□□ 0.32
TRA2BP62995 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 AC138932.1-201ENST00000534164 6830 ntBASIC17.07■□□□□ 0.32
TRA2BP62995 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRA2BP62995 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRA2BP62995 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRA2BP62995 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRA2BP62995 AC090340.1-201ENST00000620778 4980 ntBASIC17.06■□□□□ 0.32
TRA2BP62995 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.06■□□□□ 0.32
TRA2BP62995 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRA2BP62995 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRA2BP62995 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.06■□□□□ 0.32
TRA2BP62995 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 AC112907.2-201ENST00000448639 330 ntBASIC17.06■□□□□ 0.32
TRA2BP62995 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.06■□□□□ 0.32
TRA2BP62995 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.06■□□□□ 0.32
TRA2BP62995 ZNF444P1-201ENST00000559497 298 ntBASIC17.06■□□□□ 0.32
TRA2BP62995 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.06■□□□□ 0.32
TRA2BP62995 AC116407.2-201ENST00000613639 860 ntBASIC17.06■□□□□ 0.32
TRA2BP62995 AC009154.2-201ENST00000621177 724 ntBASIC17.06■□□□□ 0.32
TRA2BP62995 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.06■□□□□ 0.32
TRA2BP62995 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRA2BP62995 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms