Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMC4P56277 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CMC4P56277 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.47□□□□□ -0.25
CMC4P56277 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CMC4P56277 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 AC093010.1-201ENST00000473625 1624 ntBASIC13.47□□□□□ -0.25
CMC4P56277 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CMC4P56277 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.47□□□□□ -0.25
CMC4P56277 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.47□□□□□ -0.25
CMC4P56277 AC011840.4-201ENST00000578471 627 ntBASIC13.47□□□□□ -0.25
CMC4P56277 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.47□□□□□ -0.25
CMC4P56277 AC004263.2-201ENST00000617183 678 ntBASIC13.47□□□□□ -0.25
CMC4P56277 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CMC4P56277 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 AC005082.1-201ENST00000413042 2259 ntBASIC13.47□□□□□ -0.25
CMC4P56277 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.47□□□□□ -0.25
CMC4P56277 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CMC4P56277 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CMC4P56277 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
CMC4P56277 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.46□□□□□ -0.25
CMC4P56277 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.46□□□□□ -0.25
CMC4P56277 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.46□□□□□ -0.25
CMC4P56277 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.46□□□□□ -0.25
CMC4P56277 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.46□□□□□ -0.25
CMC4P56277 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CMC4P56277 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.46□□□□□ -0.25
CMC4P56277 AL358472.4-201ENST00000633140 710 ntBASIC13.46□□□□□ -0.25
CMC4P56277 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.46□□□□□ -0.25
CMC4P56277 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CMC4P56277 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
CMC4P56277 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 AC004408.2-201ENST00000623613 2777 ntBASIC13.46□□□□□ -0.26
CMC4P56277 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.46□□□□□ -0.26
CMC4P56277 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.46□□□□□ -0.26
CMC4P56277 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CMC4P56277 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CMC4P56277 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CMC4P56277 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms