Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.32■□□□□ 0.84
EPHB4P54760 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.32■□□□□ 0.84
EPHB4P54760 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EPHB4P54760 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHB4P54760 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EPHB4P54760 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHB4P54760 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHB4P54760 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHB4P54760 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHB4P54760 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EPHB4P54760 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHB4P54760 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
EPHB4P54760 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHB4P54760 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHB4P54760 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHB4P54760 AF186996.4-201ENST00000467186 377 ntBASIC20.31■□□□□ 0.84
EPHB4P54760 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHB4P54760 AL691403.2-201ENST00000618460 490 ntBASIC20.31■□□□□ 0.84
EPHB4P54760 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EPHB4P54760 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.31■□□□□ 0.84
EPHB4P54760 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHB4P54760 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.31■□□□□ 0.84
EPHB4P54760 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHB4P54760 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 AC090164.3-201ENST00000610780 2143 ntBASIC20.3■□□□□ 0.84
EPHB4P54760 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
EPHB4P54760 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
EPHB4P54760 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EPHB4P54760 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
EPHB4P54760 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.3■□□□□ 0.84
EPHB4P54760 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHB4P54760 GUSBP12-201ENST00000513727 720 ntBASIC20.3■□□□□ 0.84
EPHB4P54760 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.3■□□□□ 0.84
EPHB4P54760 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.3■□□□□ 0.84
EPHB4P54760 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHB4P54760 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHB4P54760 AC008556.1-201ENST00000610908 2040 ntBASIC20.3■□□□□ 0.84
EPHB4P54760 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.3■□□□□ 0.84
EPHB4P54760 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHB4P54760 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 AC018470.1-201ENST00000624790 3129 ntBASIC20.29■□□□□ 0.84
EPHB4P54760 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHB4P54760 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 AC018712.1-201ENST00000455767 687 ntBASIC20.29■□□□□ 0.84
EPHB4P54760 MINOS1P3-201ENST00000457048 203 ntBASIC20.29■□□□□ 0.84
EPHB4P54760 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.29■□□□□ 0.84
EPHB4P54760 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHB4P54760 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHB4P54760 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
EPHB4P54760 AL355385.1-201ENST00000606123 409 ntBASIC20.29■□□□□ 0.84
EPHB4P54760 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHB4P54760 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHB4P54760 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHB4P54760 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.28■□□□□ 0.84
EPHB4P54760 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EPHB4P54760 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.28■□□□□ 0.84
EPHB4P54760 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms