Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.1■■□□□ 1.13
PDE1AP54750 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDE1AP54750 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PDE1AP54750 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE1AP54750 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PDE1AP54750 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.1■■□□□ 1.13
PDE1AP54750 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC22.1■■□□□ 1.13
PDE1AP54750 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC22.1■■□□□ 1.13
PDE1AP54750 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE1AP54750 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.1■■□□□ 1.13
PDE1AP54750 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE1AP54750 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDE1AP54750 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDE1AP54750 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PDE1AP54750 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PDE1AP54750 GNAS-203ENST00000306120 1878 ntBASIC22.09■■□□□ 1.13
PDE1AP54750 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC22.09■■□□□ 1.13
PDE1AP54750 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PDE1AP54750 LINC01311-201ENST00000565162 1445 ntBASIC22.09■■□□□ 1.13
PDE1AP54750 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 IGHGP-201ENST00000390555 1178 ntBASIC22.09■■□□□ 1.13
PDE1AP54750 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 KRT18P21-201ENST00000515767 1272 ntBASIC22.09■■□□□ 1.13
PDE1AP54750 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.09■■□□□ 1.13
PDE1AP54750 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.09■■□□□ 1.13
PDE1AP54750 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.09■■□□□ 1.13
PDE1AP54750 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC22.09■■□□□ 1.13
PDE1AP54750 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.09■■□□□ 1.13
PDE1AP54750 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDE1AP54750 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.09■■□□□ 1.13
PDE1AP54750 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDE1AP54750 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.08■■□□□ 1.13
PDE1AP54750 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.08■■□□□ 1.13
PDE1AP54750 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDE1AP54750 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.08■■□□□ 1.13
PDE1AP54750 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDE1AP54750 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PDE1AP54750 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.08■■□□□ 1.13
PDE1AP54750 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
PDE1AP54750 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.08■■□□□ 1.12
PDE1AP54750 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE1AP54750 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.08■■□□□ 1.12
PDE1AP54750 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDE1AP54750 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PDE1AP54750 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
PDE1AP54750 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE1AP54750 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE1AP54750 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
PDE1AP54750 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.07■■□□□ 1.12
PDE1AP54750 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.07■■□□□ 1.12
PDE1AP54750 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.07■■□□□ 1.12
PDE1AP54750 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE1AP54750 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
PDE1AP54750 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.07■■□□□ 1.12
PDE1AP54750 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.07■■□□□ 1.12
PDE1AP54750 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDE1AP54750 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.06■■□□□ 1.12
PDE1AP54750 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PDE1AP54750 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PDE1AP54750 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PDE1AP54750 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms