Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLCN2P51788 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLCN2P51788 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.54■□□□□ 0.4
CLCN2P51788 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLCN2P51788 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLCN2P51788 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCN2P51788 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
CLCN2P51788 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN2P51788 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLCN2P51788 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLCN2P51788 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CLCN2P51788 MIR1224-201ENST00000408193 85 ntBASIC17.53■□□□□ 0.4
CLCN2P51788 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 AL138966.2-201ENST00000621997 464 ntBASIC17.53■□□□□ 0.4
CLCN2P51788 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CLCN2P51788 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 AL391005.1-201ENST00000623953 2435 ntBASIC17.53■□□□□ 0.4
CLCN2P51788 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCN2P51788 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCN2P51788 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLCN2P51788 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCN2P51788 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN2P51788 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLCN2P51788 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.52■□□□□ 0.4
CLCN2P51788 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.52■□□□□ 0.4
CLCN2P51788 AC008622.2-201ENST00000617006 1229 ntBASIC17.52■□□□□ 0.4
CLCN2P51788 AC141257.4-201ENST00000634557 245 ntBASIC17.52■□□□□ 0.4
CLCN2P51788 AC136944.6-201ENST00000634818 245 ntBASIC17.52■□□□□ 0.4
CLCN2P51788 AC068587.9-201ENST00000641814 219 ntBASIC17.52■□□□□ 0.4
CLCN2P51788 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLCN2P51788 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLCN2P51788 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLCN2P51788 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.52■□□□□ 0.39
CLCN2P51788 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
CLCN2P51788 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.52■□□□□ 0.39
CLCN2P51788 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.52■□□□□ 0.39
CLCN2P51788 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLCN2P51788 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN2P51788 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.51■□□□□ 0.39
CLCN2P51788 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLCN2P51788 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CLCN2P51788 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.51■□□□□ 0.39
CLCN2P51788 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLCN2P51788 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms