Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA2P51531 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SMARCA2P51531 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC31.94■■■□□ 2.7
SMARCA2P51531 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC31.94■■■□□ 2.7
SMARCA2P51531 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCA2P51531 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCA2P51531 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
SMARCA2P51531 AL049812.1-201ENST00000432563 2267 ntBASIC31.93■■■□□ 2.7
SMARCA2P51531 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
SMARCA2P51531 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC31.93■■■□□ 2.7
SMARCA2P51531 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 POLD4-207ENST00000531239 584 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCA2P51531 GREM1-201ENST00000560677 623 ntTSL 4 BASIC31.93■■■□□ 2.7
SMARCA2P51531 AL513210.1-201ENST00000629608 234 ntBASIC31.93■■■□□ 2.7
SMARCA2P51531 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
SMARCA2P51531 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCA2P51531 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC31.92■■■□□ 2.7
SMARCA2P51531 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMARCA2P51531 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC31.92■■■□□ 2.7
SMARCA2P51531 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC31.92■■■□□ 2.7
SMARCA2P51531 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMARCA2P51531 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMARCA2P51531 CBR1-202ENST00000399191 838 ntTSL 3 BASIC31.92■■■□□ 2.7
SMARCA2P51531 KRT19P2-202ENST00000557173 1012 ntBASIC31.92■■■□□ 2.7
SMARCA2P51531 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC31.92■■■□□ 2.7
SMARCA2P51531 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
SMARCA2P51531 TBC1D3P5-201ENST00000579401 1545 ntBASIC31.92■■■□□ 2.7
SMARCA2P51531 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC31.92■■■□□ 2.7
SMARCA2P51531 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC31.91■■■□□ 2.7
SMARCA2P51531 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC31.91■■■□□ 2.7
SMARCA2P51531 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
SMARCA2P51531 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC31.91■■■□□ 2.7
SMARCA2P51531 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC31.91■■■□□ 2.7
SMARCA2P51531 ACTG1P14-201ENST00000446382 1122 ntBASIC31.91■■■□□ 2.7
SMARCA2P51531 HLA-J-203ENST00000494367 1087 ntBASIC31.91■■■□□ 2.7
SMARCA2P51531 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 AC093512.1-201ENST00000617969 520 ntBASIC31.91■■■□□ 2.7
SMARCA2P51531 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC31.91■■■□□ 2.7
SMARCA2P51531 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC31.91■■■□□ 2.7
SMARCA2P51531 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
SMARCA2P51531 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMARCA2P51531 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCA2P51531 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
SMARCA2P51531 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCA2P51531 AL020989.1-201ENST00000422979 469 ntBASIC31.9■■■□□ 2.7
SMARCA2P51531 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC31.9■■■□□ 2.7
SMARCA2P51531 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC31.9■■■□□ 2.7
SMARCA2P51531 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC31.9■■■□□ 2.7
SMARCA2P51531 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC31.9■■■□□ 2.7
SMARCA2P51531 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCA2P51531 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC31.9■■■□□ 2.7
SMARCA2P51531 ADH5P3-201ENST00000433842 1137 ntBASIC31.9■■■□□ 2.7
SMARCA2P51531 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
SMARCA2P51531 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC31.9■■■□□ 2.7
SMARCA2P51531 PC-214ENST00000628663 1470 ntTSL 5 BASIC31.9■■■□□ 2.7
SMARCA2P51531 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC31.89■■■□□ 2.7
SMARCA2P51531 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC31.89■■■□□ 2.7
SMARCA2P51531 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 AC093484.2-201ENST00000580996 2166 ntBASIC31.89■■■□□ 2.7
SMARCA2P51531 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCA2P51531 KLF4P1-201ENST00000412782 1185 ntBASIC31.89■■■□□ 2.7
SMARCA2P51531 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC31.89■■■□□ 2.7
SMARCA2P51531 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 CCND1-203ENST00000536559 553 ntTSL 3 BASIC31.89■■■□□ 2.7
SMARCA2P51531 AC005498.2-205ENST00000593218 784 ntBASIC31.89■■■□□ 2.7
SMARCA2P51531 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCA2P51531 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SMARCA2P51531 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC31.88■■■□□ 2.69
SMARCA2P51531 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC31.88■■■□□ 2.69
SMARCA2P51531 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC31.88■■■□□ 2.69
SMARCA2P51531 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
SMARCA2P51531 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCA2P51531 PTMS-202ENST00000389462 773 ntTSL 2 BASIC31.88■■■□□ 2.69
SMARCA2P51531 RHOQP3-201ENST00000437982 621 ntBASIC31.88■■■□□ 2.69
SMARCA2P51531 AC244107.1-201ENST00000442033 332 ntBASIC31.88■■■□□ 2.69
SMARCA2P51531 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC31.88■■■□□ 2.69
SMARCA2P51531 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC31.88■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms