Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2CP42773 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2CP42773 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2CP42773 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.11■□□□□ 0.33
CDKN2CP42773 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.11■□□□□ 0.33
CDKN2CP42773 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 SNORA78-201ENST00000459373 127 ntBASIC17.11■□□□□ 0.33
CDKN2CP42773 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.11■□□□□ 0.33
CDKN2CP42773 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 AC009065.1-201ENST00000564055 1225 ntBASIC17.11■□□□□ 0.33
CDKN2CP42773 MIR3180-4-201ENST00000582223 153 ntBASIC17.11■□□□□ 0.33
CDKN2CP42773 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2CP42773 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2CP42773 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2CP42773 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2CP42773 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2CP42773 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2CP42773 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2CP42773 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2CP42773 MIR718-201ENST00000390190 70 ntBASIC17.1■□□□□ 0.33
CDKN2CP42773 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDKN2CP42773 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2CP42773 TSPY15P-201ENST00000457163 923 ntBASIC17.1■□□□□ 0.33
CDKN2CP42773 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2CP42773 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDKN2CP42773 SEC1P-202ENST00000473944 940 ntBASIC17.1■□□□□ 0.33
CDKN2CP42773 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2CP42773 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2CP42773 C2orf69P3-201ENST00000565542 1120 ntBASIC17.1■□□□□ 0.33
CDKN2CP42773 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2CP42773 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2CP42773 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2CP42773 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2CP42773 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 KRT8P9-201ENST00000558927 1449 ntBASIC17.1■□□□□ 0.33
CDKN2CP42773 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDKN2CP42773 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2CP42773 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDKN2CP42773 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDKN2CP42773 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 TSPY14P-201ENST00000303979 915 ntBASIC17.09■□□□□ 0.33
CDKN2CP42773 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDKN2CP42773 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.09■□□□□ 0.33
CDKN2CP42773 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 AC010653.2-201ENST00000623505 997 ntBASIC17.09■□□□□ 0.33
CDKN2CP42773 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 CYP2D8P-201ENST00000433633 1490 ntBASIC17.09■□□□□ 0.33
CDKN2CP42773 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2CP42773 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2CP42773 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKN2CP42773 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2CP42773 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 AL355312.1-201ENST00000407115 2176 ntBASIC17.09■□□□□ 0.33
CDKN2CP42773 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.09■□□□□ 0.33
CDKN2CP42773 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDKN2CP42773 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDKN2CP42773 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms