Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC009102.3-201ENST00000623118 1491 ntBASIC19.73■□□□□ 0.75
USP8P40818 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.73■□□□□ 0.75
USP8P40818 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP8P40818 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
USP8P40818 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 REXO1L9P-201ENST00000604264 2108 ntBASIC19.72■□□□□ 0.75
USP8P40818 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP8P40818 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.72■□□□□ 0.75
USP8P40818 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP8P40818 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 SDHAP2-201ENST00000455183 2001 ntBASIC19.71■□□□□ 0.75
USP8P40818 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.71■□□□□ 0.75
USP8P40818 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 MIR149-201ENST00000384879 89 ntBASIC19.71■□□□□ 0.75
USP8P40818 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.71■□□□□ 0.75
USP8P40818 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.71■□□□□ 0.75
USP8P40818 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 AL512604.3-201ENST00000569583 964 ntBASIC19.71■□□□□ 0.75
USP8P40818 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.71■□□□□ 0.75
USP8P40818 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
USP8P40818 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP8P40818 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.71■□□□□ 0.75
USP8P40818 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP8P40818 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
USP8P40818 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP8P40818 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
USP8P40818 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 AC104390.1-201ENST00000555663 520 ntBASIC19.7■□□□□ 0.74
USP8P40818 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.7■□□□□ 0.74
USP8P40818 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 AC133561.5-201ENST00000635547 218 ntBASIC19.7■□□□□ 0.74
USP8P40818 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP8P40818 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.7■□□□□ 0.74
USP8P40818 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP8P40818 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP8P40818 FER1L4-210ENST00000615531 5998 ntBASIC19.69■□□□□ 0.74
USP8P40818 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.69■□□□□ 0.74
USP8P40818 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms