Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL15A1P39059 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.83■■□□□ 1.25
COL15A1P39059 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.83■■□□□ 1.25
COL15A1P39059 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.83■■□□□ 1.25
COL15A1P39059 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL15A1P39059 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
COL15A1P39059 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.82■■□□□ 1.24
COL15A1P39059 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 KRT18P3-201ENST00000451602 1288 ntBASIC22.82■■□□□ 1.24
COL15A1P39059 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
COL15A1P39059 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.82■■□□□ 1.24
COL15A1P39059 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.82■■□□□ 1.24
COL15A1P39059 AC105339.3-201ENST00000560043 636 ntBASIC22.82■■□□□ 1.24
COL15A1P39059 AP000867.4-201ENST00000641616 219 ntBASIC22.82■■□□□ 1.24
COL15A1P39059 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.82■■□□□ 1.24
COL15A1P39059 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.82■■□□□ 1.24
COL15A1P39059 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL15A1P39059 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL15A1P39059 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL15A1P39059 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.81■■□□□ 1.24
COL15A1P39059 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.81■■□□□ 1.24
COL15A1P39059 YBX2P1-201ENST00000394192 760 ntBASIC22.81■■□□□ 1.24
COL15A1P39059 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
COL15A1P39059 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.81■■□□□ 1.24
COL15A1P39059 LAGE3P1-201ENST00000425356 484 ntBASIC22.81■■□□□ 1.24
COL15A1P39059 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.81■■□□□ 1.24
COL15A1P39059 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.81■■□□□ 1.24
COL15A1P39059 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.81■■□□□ 1.24
COL15A1P39059 UNC93B6-202ENST00000528242 690 ntBASIC22.81■■□□□ 1.24
COL15A1P39059 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.81■■□□□ 1.24
COL15A1P39059 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL15A1P39059 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.81■■□□□ 1.24
COL15A1P39059 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 AC005082.1-201ENST00000413042 2259 ntBASIC22.8■■□□□ 1.24
COL15A1P39059 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.8■■□□□ 1.24
COL15A1P39059 AC007967.3-201ENST00000434308 558 ntBASIC22.8■■□□□ 1.24
COL15A1P39059 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
COL15A1P39059 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.8■■□□□ 1.24
COL15A1P39059 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.8■■□□□ 1.24
COL15A1P39059 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL15A1P39059 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.79■■□□□ 1.24
COL15A1P39059 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 TNXA-203ENST00000507684 2038 ntBASIC22.79■■□□□ 1.24
COL15A1P39059 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
COL15A1P39059 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.79■■□□□ 1.24
COL15A1P39059 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.79■■□□□ 1.24
COL15A1P39059 AC040169.1-201ENST00000565382 521 ntBASIC22.79■■□□□ 1.24
COL15A1P39059 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.79■■□□□ 1.24
COL15A1P39059 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.79■■□□□ 1.24
COL15A1P39059 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
COL15A1P39059 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.79■■□□□ 1.24
COL15A1P39059 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.79■■□□□ 1.24
COL15A1P39059 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.79■■□□□ 1.24
COL15A1P39059 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
COL15A1P39059 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.78■■□□□ 1.24
COL15A1P39059 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.78■■□□□ 1.24
COL15A1P39059 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.78■■□□□ 1.24
COL15A1P39059 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
COL15A1P39059 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC22.78■■□□□ 1.24
COL15A1P39059 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms