Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL162741.1-201ENST00000565563 1558 ntBASIC16.61■□□□□ 0.25
SHC1P29353 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHC1P29353 AC139713.2-201ENST00000641328 2723 ntBASIC16.61■□□□□ 0.25
SHC1P29353 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 AC092647.4-201ENST00000457211 535 ntBASIC16.61■□□□□ 0.25
SHC1P29353 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.61■□□□□ 0.25
SHC1P29353 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.61■□□□□ 0.25
SHC1P29353 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHC1P29353 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHC1P29353 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHC1P29353 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
SHC1P29353 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.6■□□□□ 0.25
SHC1P29353 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHC1P29353 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 STARP1-201ENST00000397973 869 ntBASIC16.6■□□□□ 0.25
SHC1P29353 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHC1P29353 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC1P29353 FAM8A6P-201ENST00000407496 1135 ntBASIC16.6■□□□□ 0.25
SHC1P29353 MIR1224-201ENST00000408193 85 ntBASIC16.6■□□□□ 0.25
SHC1P29353 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.6■□□□□ 0.25
SHC1P29353 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC1P29353 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 AC092597.1-201ENST00000487352 616 ntBASIC16.6■□□□□ 0.25
SHC1P29353 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC1P29353 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC1P29353 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 NTF6B-201ENST00000591913 560 ntBASIC16.6■□□□□ 0.25
SHC1P29353 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.6■□□□□ 0.25
SHC1P29353 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 AC010331.1-201ENST00000611423 582 ntBASIC16.6■□□□□ 0.25
SHC1P29353 AC079602.3-201ENST00000623931 403 ntBASIC16.6■□□□□ 0.25
SHC1P29353 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.6■□□□□ 0.25
SHC1P29353 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHC1P29353 MYC-208ENST00000641036 567 ntBASIC16.6■□□□□ 0.25
SHC1P29353 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.6■□□□□ 0.25
SHC1P29353 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.6■□□□□ 0.25
SHC1P29353 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHC1P29353 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
SHC1P29353 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SHC1P29353 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC1P29353 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC1P29353 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC1P29353 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.59■□□□□ 0.25
SHC1P29353 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.59■□□□□ 0.25
SHC1P29353 HOMER2P1-201ENST00000455653 964 ntBASIC16.59■□□□□ 0.25
SHC1P29353 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC1P29353 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.59■□□□□ 0.25
SHC1P29353 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.59■□□□□ 0.25
SHC1P29353 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SHC1P29353 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHC1P29353 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms