Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN6P29350 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN6P29350 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.18■□□□□ 0.34
PTPN6P29350 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PTPN6P29350 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PTPN6P29350 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PTPN6P29350 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PTPN6P29350 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.17■□□□□ 0.34
PTPN6P29350 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.17■□□□□ 0.34
PTPN6P29350 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.17■□□□□ 0.34
PTPN6P29350 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.17■□□□□ 0.34
PTPN6P29350 AC104390.1-201ENST00000555663 520 ntBASIC17.17■□□□□ 0.34
PTPN6P29350 AC108860.2-201ENST00000562760 2183 ntBASIC17.17■□□□□ 0.34
PTPN6P29350 AL512604.3-201ENST00000569583 964 ntBASIC17.17■□□□□ 0.34
PTPN6P29350 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.17■□□□□ 0.34
PTPN6P29350 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PTPN6P29350 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PTPN6P29350 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN6P29350 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PTPN6P29350 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PTPN6P29350 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.16■□□□□ 0.34
PTPN6P29350 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN6P29350 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN6P29350 MIR3180-4-201ENST00000582223 153 ntBASIC17.16■□□□□ 0.34
PTPN6P29350 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN6P29350 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PTPN6P29350 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN6P29350 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.16■□□□□ 0.34
PTPN6P29350 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.16■□□□□ 0.34
PTPN6P29350 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN6P29350 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN6P29350 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PTPN6P29350 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.16■□□□□ 0.34
PTPN6P29350 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PTPN6P29350 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
PTPN6P29350 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 AC090340.1-201ENST00000620778 4980 ntBASIC17.15■□□□□ 0.34
PTPN6P29350 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.15■□□□□ 0.34
PTPN6P29350 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.15■□□□□ 0.34
PTPN6P29350 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 HCG11-201ENST00000411553 5696 ntBASIC17.15■□□□□ 0.34
PTPN6P29350 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PTPN6P29350 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PTPN6P29350 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PTPN6P29350 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PTPN6P29350 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms