Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
ACKR3P25106 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.75■□□□□ 0.11
ACKR3P25106 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ACKR3P25106 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ACKR3P25106 LINC01568-207ENST00000641790 1380 ntBASIC15.75■□□□□ 0.11
ACKR3P25106 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
ACKR3P25106 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ACKR3P25106 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.74■□□□□ 0.11
ACKR3P25106 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 AC009065.1-201ENST00000564055 1225 ntBASIC15.74■□□□□ 0.11
ACKR3P25106 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.74■□□□□ 0.11
ACKR3P25106 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.74■□□□□ 0.11
ACKR3P25106 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ACKR3P25106 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ACKR3P25106 FLJ13224-201ENST00000313737 1514 ntBASIC15.73■□□□□ 0.11
ACKR3P25106 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.73■□□□□ 0.11
ACKR3P25106 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.73■□□□□ 0.11
ACKR3P25106 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.73■□□□□ 0.11
ACKR3P25106 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.73■□□□□ 0.11
ACKR3P25106 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.73■□□□□ 0.11
ACKR3P25106 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.73■□□□□ 0.11
ACKR3P25106 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
ACKR3P25106 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ACKR3P25106 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ACKR3P25106 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
ACKR3P25106 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.72■□□□□ 0.11
ACKR3P25106 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.72■□□□□ 0.11
ACKR3P25106 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.72■□□□□ 0.11
ACKR3P25106 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.72■□□□□ 0.11
ACKR3P25106 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 AC087499.1-201ENST00000418141 1075 ntBASIC15.72■□□□□ 0.11
ACKR3P25106 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.72■□□□□ 0.11
ACKR3P25106 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ACKR3P25106 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.72■□□□□ 0.11
ACKR3P25106 AL512604.3-201ENST00000569583 964 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms