Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.85■□□□□ 0.29
NR4A1P22736 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR4A1P22736 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 AL596275.1-201ENST00000423464 877 ntBASIC16.84■□□□□ 0.29
NR4A1P22736 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 MIR4497-201ENST00000583208 89 ntBASIC16.84■□□□□ 0.29
NR4A1P22736 AC113410.3-201ENST00000623366 203 ntBASIC16.84■□□□□ 0.29
NR4A1P22736 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
NR4A1P22736 PCDH8P1-201ENST00000428983 2773 ntBASIC16.84■□□□□ 0.29
NR4A1P22736 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.84■□□□□ 0.29
NR4A1P22736 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NR4A1P22736 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NR4A1P22736 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.84■□□□□ 0.29
NR4A1P22736 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NR4A1P22736 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
NR4A1P22736 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
NR4A1P22736 AC068418.2-201ENST00000577309 3703 ntBASIC16.83■□□□□ 0.29
NR4A1P22736 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
NR4A1P22736 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NR4A1P22736 NIFKP9-201ENST00000419265 221 ntBASIC16.83■□□□□ 0.28
NR4A1P22736 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 KRT8P8-201ENST00000434750 1448 ntBASIC16.83■□□□□ 0.28
NR4A1P22736 KSR1P1-201ENST00000446298 240 ntBASIC16.83■□□□□ 0.28
NR4A1P22736 SNORA78-201ENST00000459373 127 ntBASIC16.83■□□□□ 0.28
NR4A1P22736 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.83■□□□□ 0.28
NR4A1P22736 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NR4A1P22736 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.83■□□□□ 0.28
NR4A1P22736 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NR4A1P22736 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR4A1P22736 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NR4A1P22736 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR4A1P22736 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NR4A1P22736 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NR4A1P22736 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR4A1P22736 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms