Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PF4V1P10720 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.35□□□□□ -0.11
PF4V1P10720 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PF4V1P10720 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PF4V1P10720 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.35□□□□□ -0.11
PF4V1P10720 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.35□□□□□ -0.11
PF4V1P10720 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PF4V1P10720 AL162741.1-201ENST00000565563 1558 ntBASIC14.34□□□□□ -0.11
PF4V1P10720 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 AL391807.1-203ENST00000604392 2365 ntBASIC14.34□□□□□ -0.11
PF4V1P10720 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.34□□□□□ -0.11
PF4V1P10720 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PF4V1P10720 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 PVRIG2P-201ENST00000435460 978 ntBASIC14.34□□□□□ -0.11
PF4V1P10720 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.34□□□□□ -0.11
PF4V1P10720 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.34□□□□□ -0.11
PF4V1P10720 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.34□□□□□ -0.11
PF4V1P10720 KRT8P26-201ENST00000534154 1276 ntBASIC14.34□□□□□ -0.11
PF4V1P10720 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PF4V1P10720 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.34□□□□□ -0.11
PF4V1P10720 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.34□□□□□ -0.11
PF4V1P10720 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PF4V1P10720 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.33□□□□□ -0.11
PF4V1P10720 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
PF4V1P10720 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.33□□□□□ -0.11
PF4V1P10720 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
PF4V1P10720 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PF4V1P10720 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PF4V1P10720 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PF4V1P10720 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.33□□□□□ -0.11
PF4V1P10720 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.33□□□□□ -0.12
PF4V1P10720 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.33□□□□□ -0.12
PF4V1P10720 AC026396.1-201ENST00000419388 421 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.33□□□□□ -0.12
PF4V1P10720 TSPY22P-201ENST00000427496 604 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
PF4V1P10720 AC111152.3-201ENST00000569699 673 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.33□□□□□ -0.12
PF4V1P10720 NPAP1P7-201ENST00000613027 823 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 AC079602.3-201ENST00000623931 403 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.33□□□□□ -0.12
PF4V1P10720 KRT18P1-202ENST00000452408 1331 ntBASIC14.33□□□□□ -0.12
PF4V1P10720 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PF4V1P10720 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PF4V1P10720 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PF4V1P10720 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms