Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.72■□□□□ 0.43
SP9P0CG40 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.72■□□□□ 0.43
SP9P0CG40 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SP9P0CG40 GK-202ENST00000378941 458 ntTSL 3 BASIC17.72■□□□□ 0.43
SP9P0CG40 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.72■□□□□ 0.43
SP9P0CG40 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.72■□□□□ 0.43
SP9P0CG40 AL020989.1-201ENST00000422979 469 ntBASIC17.72■□□□□ 0.43
SP9P0CG40 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.72■□□□□ 0.43
SP9P0CG40 AJ011932.1-201ENST00000621707 465 ntBASIC17.72■□□□□ 0.43
SP9P0CG40 AC105339.1-204ENST00000636249 355 ntBASIC17.72■□□□□ 0.43
SP9P0CG40 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SP9P0CG40 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SP9P0CG40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.72■□□□□ 0.43
SP9P0CG40 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SP9P0CG40 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
SP9P0CG40 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 AC096633.1-201ENST00000422446 749 ntBASIC17.71■□□□□ 0.43
SP9P0CG40 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.71■□□□□ 0.43
SP9P0CG40 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 RNA5SP421-201ENST00000516864 134 ntBASIC17.71■□□□□ 0.43
SP9P0CG40 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.71■□□□□ 0.43
SP9P0CG40 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 AC091812.2-201ENST00000619081 385 ntBASIC17.71■□□□□ 0.43
SP9P0CG40 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.71■□□□□ 0.43
SP9P0CG40 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SP9P0CG40 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SP9P0CG40 NCF1C-201ENST00000438382 1427 ntBASIC17.71■□□□□ 0.43
SP9P0CG40 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.71■□□□□ 0.42
SP9P0CG40 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SP9P0CG40 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.71■□□□□ 0.42
SP9P0CG40 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.71■□□□□ 0.42
SP9P0CG40 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SP9P0CG40 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.7■□□□□ 0.42
SP9P0CG40 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.7■□□□□ 0.42
SP9P0CG40 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.7■□□□□ 0.42
SP9P0CG40 MRPL20P1-201ENST00000400819 433 ntBASIC17.7■□□□□ 0.42
SP9P0CG40 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.7■□□□□ 0.42
SP9P0CG40 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 FAM86GP-201ENST00000448322 971 ntBASIC17.7■□□□□ 0.42
SP9P0CG40 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.7■□□□□ 0.42
SP9P0CG40 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
SP9P0CG40 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.7■□□□□ 0.42
SP9P0CG40 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 AC025580.3-201ENST00000617932 1424 ntBASIC17.7■□□□□ 0.42
SP9P0CG40 AC010460.3-201ENST00000511359 1579 ntBASIC17.7■□□□□ 0.42
SP9P0CG40 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SP9P0CG40 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.7■□□□□ 0.42
SP9P0CG40 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SP9P0CG40 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.69■□□□□ 0.42
SP9P0CG40 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.69■□□□□ 0.42
SP9P0CG40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.69■□□□□ 0.42
SP9P0CG40 AC103564.2-201ENST00000432853 1299 ntBASIC17.69■□□□□ 0.42
SP9P0CG40 RHOQP3-201ENST00000437982 621 ntBASIC17.69■□□□□ 0.42
SP9P0CG40 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.69■□□□□ 0.42
SP9P0CG40 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
SP9P0CG40 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.69■□□□□ 0.42
SP9P0CG40 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.69■□□□□ 0.42
SP9P0CG40 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.69■□□□□ 0.42
SP9P0CG40 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 LINC00628-201ENST00000628516 1289 ntBASIC17.69■□□□□ 0.42
SP9P0CG40 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.69■□□□□ 0.42
SP9P0CG40 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SP9P0CG40 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms