Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 HTR7P1-202ENST00000624664 4411 ntBASIC18.97■□□□□ 0.63
APOEP02649 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.96■□□□□ 0.63
APOEP02649 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.96■□□□□ 0.63
APOEP02649 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.96■□□□□ 0.63
APOEP02649 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.96■□□□□ 0.63
APOEP02649 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.96■□□□□ 0.63
APOEP02649 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.96■□□□□ 0.63
APOEP02649 AC116407.4-201ENST00000623319 1061 ntBASIC18.96■□□□□ 0.63
APOEP02649 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
APOEP02649 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.96■□□□□ 0.63
APOEP02649 GMCL1P1-201ENST00000463439 1581 ntBASIC18.96■□□□□ 0.63
APOEP02649 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.96■□□□□ 0.63
APOEP02649 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.96■□□□□ 0.63
APOEP02649 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.96■□□□□ 0.63
APOEP02649 KRT89P-201ENST00000620027 1478 ntBASIC18.96■□□□□ 0.63
APOEP02649 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOEP02649 NOC2LP2-201ENST00000407594 1944 ntBASIC18.96■□□□□ 0.63
APOEP02649 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 AC005332.8-201ENST00000622750 2735 ntBASIC18.95■□□□□ 0.62
APOEP02649 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
APOEP02649 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.95■□□□□ 0.62
APOEP02649 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.95■□□□□ 0.62
APOEP02649 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.95■□□□□ 0.62
APOEP02649 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.95■□□□□ 0.62
APOEP02649 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.95■□□□□ 0.62
APOEP02649 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.95■□□□□ 0.62
APOEP02649 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.95■□□□□ 0.62
APOEP02649 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.95■□□□□ 0.62
APOEP02649 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
APOEP02649 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOEP02649 AL024508.2-201ENST00000607749 1894 ntBASIC18.94■□□□□ 0.62
APOEP02649 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.94■□□□□ 0.62
APOEP02649 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.94■□□□□ 0.62
APOEP02649 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
APOEP02649 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
APOEP02649 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.94■□□□□ 0.62
APOEP02649 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.94■□□□□ 0.62
APOEP02649 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.94■□□□□ 0.62
APOEP02649 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.94■□□□□ 0.62
APOEP02649 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APOEP02649 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APOEP02649 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms