Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HLA-DQA1P01909 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 AC068587.6-202ENST00000641839 5619 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CNN2P6-201ENST00000439038 900 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 AC005181.1-201ENST00000604782 1256 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 AC092666.2-201ENST00000613287 246 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 AC092437.1-201ENST00000624794 1048 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 PCDHA14-201ENST00000506751 2298 ntBASIC13.63□□□□□ -0.23
HLA-DQA1P01909 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HLA-DQA1P01909 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 MIR663A-201ENST00000385250 93 ntBASIC13.62□□□□□ -0.23
HLA-DQA1P01909 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 AC073111.5-205ENST00000641717 521 ntBASIC13.62□□□□□ -0.23
HLA-DQA1P01909 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.62□□□□□ -0.23
HLA-DQA1P01909 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms