Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-AP01891 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-AP01891 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.29■□□□□ 0.04
HLA-AP01891 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HLA-AP01891 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-AP01891 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-AP01891 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-AP01891 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 PHGDH-209ENST00000641074 1780 ntBASIC15.29■□□□□ 0.04
HLA-AP01891 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-AP01891 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-AP01891 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-AP01891 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-AP01891 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.28■□□□□ 0.04
HLA-AP01891 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 CD99P1-205ENST00000527459 561 ntBASIC15.28■□□□□ 0.04
HLA-AP01891 UNC93B5-201ENST00000530315 699 ntBASIC15.28■□□□□ 0.04
HLA-AP01891 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-AP01891 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 AL121829.2-201ENST00000620908 328 ntBASIC15.28■□□□□ 0.04
HLA-AP01891 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 HLA-A-209ENST00000638375 975 ntBASIC15.28■□□□□ 0.04
HLA-AP01891 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-AP01891 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.28■□□□□ 0.04
HLA-AP01891 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-AP01891 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-AP01891 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-AP01891 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-AP01891 KRT8P41-201ENST00000533985 1514 ntBASIC15.27■□□□□ 0.04
HLA-AP01891 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-AP01891 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms