Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN1O95832 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN1O95832 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN1O95832 DNAJB3-202ENST00000449667 1266 ntBASIC16.15■□□□□ 0.18
CLDN1O95832 KRT18P3-201ENST00000451602 1288 ntBASIC16.15■□□□□ 0.18
CLDN1O95832 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN1O95832 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 MTDHP3-201ENST00000594186 672 ntBASIC16.15■□□□□ 0.18
CLDN1O95832 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN1O95832 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN1O95832 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLDN1O95832 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN1O95832 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN1O95832 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN1O95832 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLDN1O95832 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN1O95832 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLDN1O95832 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN1O95832 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 SART3-203ENST00000546611 1184 ntBASIC16.14■□□□□ 0.17
CLDN1O95832 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN1O95832 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN1O95832 AL109659.2-201ENST00000606809 1674 ntBASIC16.14■□□□□ 0.17
CLDN1O95832 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN1O95832 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN1O95832 Z82202.1-201ENST00000623446 1880 ntBASIC16.14■□□□□ 0.17
CLDN1O95832 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN1O95832 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.13■□□□□ 0.17
CLDN1O95832 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN1O95832 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN1O95832 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN1O95832 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN1O95832 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.13■□□□□ 0.17
CLDN1O95832 AC040169.1-201ENST00000565382 521 ntBASIC16.13■□□□□ 0.17
CLDN1O95832 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN1O95832 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
CLDN1O95832 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CLDN1O95832 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN1O95832 RCC2P3-201ENST00000418112 1537 ntBASIC16.13■□□□□ 0.17
CLDN1O95832 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN1O95832 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN1O95832 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN1O95832 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms