Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC006449.5-201ENST00000610658 2098 ntBASIC16.2■□□□□ 0.18
PFDN1O60925 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PFDN1O60925 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.19■□□□□ 0.18
PFDN1O60925 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PFDN1O60925 CICP13-201ENST00000422015 2789 ntBASIC16.19■□□□□ 0.18
PFDN1O60925 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 AC006455.2-201ENST00000429931 906 ntBASIC16.19■□□□□ 0.18
PFDN1O60925 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PFDN1O60925 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.19■□□□□ 0.18
PFDN1O60925 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.19■□□□□ 0.18
PFDN1O60925 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PFDN1O60925 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.18■□□□□ 0.18
PFDN1O60925 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PFDN1O60925 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 AC092384.3-202ENST00000564646 2873 ntBASIC16.18■□□□□ 0.18
PFDN1O60925 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PFDN1O60925 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PFDN1O60925 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.18■□□□□ 0.18
PFDN1O60925 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.18■□□□□ 0.18
PFDN1O60925 AL009178.2-201ENST00000597278 2719 ntBASIC16.18■□□□□ 0.18
PFDN1O60925 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PFDN1O60925 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 AC061975.6-201ENST00000579045 1553 ntBASIC16.17■□□□□ 0.18
PFDN1O60925 AC006116.8-202ENST00000587620 1550 ntBASIC16.17■□□□□ 0.18
PFDN1O60925 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.17■□□□□ 0.18
PFDN1O60925 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PFDN1O60925 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PFDN1O60925 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.17■□□□□ 0.18
PFDN1O60925 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.17■□□□□ 0.18
PFDN1O60925 AL117332.1-201ENST00000622628 974 ntBASIC16.17■□□□□ 0.18
PFDN1O60925 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
PFDN1O60925 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.17■□□□□ 0.18
PFDN1O60925 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PFDN1O60925 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PFDN1O60925 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PFDN1O60925 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms