Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.07■□□□□ 0.32
PLOD3O60568 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.07■□□□□ 0.32
PLOD3O60568 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.07■□□□□ 0.32
PLOD3O60568 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.07■□□□□ 0.32
PLOD3O60568 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.07■□□□□ 0.32
PLOD3O60568 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 AC139887.4-201ENST00000607877 719 ntBASIC17.07■□□□□ 0.32
PLOD3O60568 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.07■□□□□ 0.32
PLOD3O60568 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PLOD3O60568 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PLOD3O60568 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.06■□□□□ 0.32
PLOD3O60568 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.06■□□□□ 0.32
PLOD3O60568 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PLOD3O60568 AC117947.1-201ENST00000427448 529 ntBASIC17.06■□□□□ 0.32
PLOD3O60568 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 AC008687.5-201ENST00000593746 558 ntBASIC17.06■□□□□ 0.32
PLOD3O60568 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PLOD3O60568 PHGDH-209ENST00000641074 1780 ntBASIC17.06■□□□□ 0.32
PLOD3O60568 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 LINC01126-201ENST00000623515 1646 ntBASIC17.06■□□□□ 0.32
PLOD3O60568 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PLOD3O60568 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.06■□□□□ 0.32
PLOD3O60568 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PLOD3O60568 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PLOD3O60568 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 STARP1-201ENST00000397973 869 ntBASIC17.05■□□□□ 0.32
PLOD3O60568 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.05■□□□□ 0.32
PLOD3O60568 KRT18P57-201ENST00000443599 1254 ntBASIC17.05■□□□□ 0.32
PLOD3O60568 RASA4DP-201ENST00000460726 1199 ntBASIC17.05■□□□□ 0.32
PLOD3O60568 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PLOD3O60568 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms