Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 RASA4DP-201ENST00000460726 1199 ntBASIC17.46■□□□□ 0.39
SLC28A2O43868 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A2O43868 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC28A2O43868 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC28A2O43868 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC28A2O43868 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A2O43868 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A2O43868 KRT18P1-202ENST00000452408 1331 ntBASIC17.46■□□□□ 0.38
SLC28A2O43868 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC28A2O43868 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC28A2O43868 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 AL590627.1-203ENST00000421194 1026 ntBASIC17.45■□□□□ 0.38
SLC28A2O43868 AP002383.4-201ENST00000442518 975 ntBASIC17.45■□□□□ 0.38
SLC28A2O43868 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC28A2O43868 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC28A2O43868 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
SLC28A2O43868 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC28A2O43868 BX640515.1-201ENST00000617215 977 ntBASIC17.45■□□□□ 0.38
SLC28A2O43868 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 AL354751.1-201ENST00000412768 1863 ntBASIC17.45■□□□□ 0.38
SLC28A2O43868 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC28A2O43868 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC28A2O43868 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC28A2O43868 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A2O43868 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC28A2O43868 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC28A2O43868 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A2O43868 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A2O43868 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC28A2O43868 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC28A2O43868 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC28A2O43868 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC28A2O43868 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC28A2O43868 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC28A2O43868 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC28A2O43868 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 AL357033.4-201ENST00000617703 1807 ntBASIC17.43■□□□□ 0.38
SLC28A2O43868 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC28A2O43868 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC28A2O43868 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms