Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC008735.5-201ENST00000623544 497 ntBASIC19.3■□□□□ 0.68
HOXA2O43364 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA2O43364 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA2O43364 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
HOXA2O43364 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HOXA2O43364 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA2O43364 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXA2O43364 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXA2O43364 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA2O43364 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXA2O43364 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.29■□□□□ 0.68
HOXA2O43364 AC122714.2-201ENST00000502787 707 ntBASIC19.29■□□□□ 0.68
HOXA2O43364 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HOXA2O43364 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXA2O43364 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA2O43364 NKAPP1-205ENST00000585790 367 ntBASIC19.29■□□□□ 0.68
HOXA2O43364 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 MTDHP4-201ENST00000600287 670 ntBASIC19.29■□□□□ 0.68
HOXA2O43364 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA2O43364 AC027601.4-201ENST00000611259 610 ntBASIC19.29■□□□□ 0.68
HOXA2O43364 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HOXA2O43364 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
HOXA2O43364 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA2O43364 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.29■□□□□ 0.68
HOXA2O43364 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 AC022898.2-201ENST00000616822 1312 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HOXA2O43364 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HOXA2O43364 AC132938.6-201ENST00000623828 1655 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HOXA2O43364 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA2O43364 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA2O43364 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXA2O43364 MIR940-201ENST00000401276 94 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 BX842568.4-201ENST00000421222 227 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 LAGE3P1-201ENST00000425356 484 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA2O43364 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA2O43364 AL591424.1-201ENST00000442569 1213 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 AC092910.1-201ENST00000482027 1129 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA2O43364 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXA2O43364 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXA2O43364 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HOXA2O43364 AC107918.4-202ENST00000641623 219 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA2O43364 ESPNP-201ENST00000270691 2015 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 AC005082.1-201ENST00000413042 2259 ntBASIC19.28■□□□□ 0.68
HOXA2O43364 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA2O43364 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA2O43364 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HOXA2O43364 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HOXA2O43364 AC104109.2-201ENST00000602919 1418 ntBASIC19.27■□□□□ 0.68
HOXA2O43364 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HOXA2O43364 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA2O43364 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HOXA2O43364 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 MIR1233-2-201ENST00000408138 82 ntBASIC19.27■□□□□ 0.68
HOXA2O43364 MIR1233-1-201ENST00000408722 82 ntBASIC19.27■□□□□ 0.68
HOXA2O43364 AC098831.1-202ENST00000438821 336 ntBASIC19.27■□□□□ 0.68
HOXA2O43364 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 AC105339.3-201ENST00000560043 636 ntBASIC19.27■□□□□ 0.68
HOXA2O43364 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA2O43364 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA2O43364 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms