Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF1O43189 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHF1O43189 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF1O43189 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
PHF1O43189 AL136038.3-201ENST00000561909 1096 ntBASIC15.67■□□□□ 0.1
PHF1O43189 AL441883.1-201ENST00000566170 1045 ntBASIC15.67■□□□□ 0.1
PHF1O43189 MIR4674-201ENST00000582457 87 ntBASIC15.67■□□□□ 0.1
PHF1O43189 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PHF1O43189 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF1O43189 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHF1O43189 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF1O43189 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF1O43189 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHF1O43189 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.66■□□□□ 0.1
PHF1O43189 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.66■□□□□ 0.1
PHF1O43189 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.66■□□□□ 0.1
PHF1O43189 PRELID1P1-202ENST00000567272 903 ntBASIC15.66■□□□□ 0.1
PHF1O43189 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.66■□□□□ 0.1
PHF1O43189 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.66■□□□□ 0.1
PHF1O43189 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.66■□□□□ 0.1
PHF1O43189 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.66■□□□□ 0.1
PHF1O43189 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PHF1O43189 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PHF1O43189 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
PHF1O43189 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PHF1O43189 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PHF1O43189 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PHF1O43189 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF1O43189 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF1O43189 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PHF1O43189 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF1O43189 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PHF1O43189 GPAT2P1-201ENST00000444924 1672 ntBASIC15.65■□□□□ 0.1
PHF1O43189 AC004870.1-201ENST00000315132 882 ntBASIC15.65■□□□□ 0.1
PHF1O43189 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.65■□□□□ 0.1
PHF1O43189 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF1O43189 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PHF1O43189 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.65■□□□□ 0.1
PHF1O43189 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.65■□□□□ 0.1
PHF1O43189 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.65■□□□□ 0.1
PHF1O43189 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms