Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.37■□□□□ 0.21
SURF4O15260 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.37■□□□□ 0.21
SURF4O15260 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SURF4O15260 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SURF4O15260 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SURF4O15260 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 PCDHA12-202ENST00000613593 2588 ntBASIC16.36■□□□□ 0.21
SURF4O15260 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.36■□□□□ 0.21
SURF4O15260 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.36■□□□□ 0.21
SURF4O15260 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.36■□□□□ 0.21
SURF4O15260 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.36■□□□□ 0.21
SURF4O15260 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.36■□□□□ 0.21
SURF4O15260 AP003071.4-201ENST00000562276 1284 ntBASIC16.36■□□□□ 0.21
SURF4O15260 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.36■□□□□ 0.21
SURF4O15260 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SURF4O15260 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.35■□□□□ 0.21
SURF4O15260 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.35■□□□□ 0.21
SURF4O15260 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.35■□□□□ 0.21
SURF4O15260 TSPY7P-201ENST00000431358 1114 ntBASIC16.35■□□□□ 0.21
SURF4O15260 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.35■□□□□ 0.21
SURF4O15260 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.35■□□□□ 0.21
SURF4O15260 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SURF4O15260 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SURF4O15260 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SURF4O15260 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.34■□□□□ 0.21
SURF4O15260 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SURF4O15260 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 AL024508.2-201ENST00000607749 1894 ntBASIC16.34■□□□□ 0.21
SURF4O15260 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SURF4O15260 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
SURF4O15260 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.34■□□□□ 0.21
SURF4O15260 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.34■□□□□ 0.21
SURF4O15260 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.34■□□□□ 0.21
SURF4O15260 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SURF4O15260 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SURF4O15260 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms