Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TO15178 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TO15178 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TO15178 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
TO15178 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
TO15178 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TO15178 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TO15178 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TO15178 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.65■□□□□ 0.26
TO15178 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
TO15178 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.65■□□□□ 0.26
TO15178 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.65■□□□□ 0.26
TO15178 AC090616.6-201ENST00000582640 721 ntBASIC16.65■□□□□ 0.26
TO15178 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.65■□□□□ 0.26
TO15178 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 AC022898.2-201ENST00000616822 1312 ntBASIC16.65■□□□□ 0.26
TO15178 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TO15178 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TO15178 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TO15178 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TO15178 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 AC138028.4-201ENST00000564984 1845 ntBASIC16.64■□□□□ 0.25
TO15178 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.64■□□□□ 0.25
TO15178 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
TO15178 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 BX276092.5-203ENST00000456199 560 ntBASIC16.64■□□□□ 0.25
TO15178 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.64■□□□□ 0.25
TO15178 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.64■□□□□ 0.25
TO15178 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TO15178 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.64■□□□□ 0.25
TO15178 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.64■□□□□ 0.25
TO15178 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TO15178 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AL390961.4-201ENST00000623958 2535 ntBASIC16.64■□□□□ 0.25
TO15178 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.64■□□□□ 0.25
TO15178 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TO15178 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.64■□□□□ 0.25
TO15178 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.64■□□□□ 0.25
TO15178 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TO15178 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TO15178 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TO15178 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
TO15178 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms