Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDX4O14627 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDX4O14627 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.36■□□□□ 0.37
CDX4O14627 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDX4O14627 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.35■□□□□ 0.37
CDX4O14627 AC122714.2-201ENST00000502787 707 ntBASIC17.35■□□□□ 0.37
CDX4O14627 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.35■□□□□ 0.37
CDX4O14627 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.35■□□□□ 0.37
CDX4O14627 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
CDX4O14627 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDX4O14627 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.35■□□□□ 0.37
CDX4O14627 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDX4O14627 AL158211.5-201ENST00000623583 2518 ntBASIC17.35■□□□□ 0.37
CDX4O14627 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.34■□□□□ 0.37
CDX4O14627 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDX4O14627 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDX4O14627 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 ELK2BP-201ENST00000415014 1224 ntBASIC17.34■□□□□ 0.37
CDX4O14627 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
CDX4O14627 BCRP1-201ENST00000444246 691 ntBASIC17.34■□□□□ 0.37
CDX4O14627 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.34■□□□□ 0.37
CDX4O14627 AL096865.1-201ENST00000606796 927 ntBASIC17.34■□□□□ 0.37
CDX4O14627 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDX4O14627 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDX4O14627 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 AC010460.3-201ENST00000511359 1579 ntBASIC17.33■□□□□ 0.37
CDX4O14627 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDX4O14627 PCDHAC2-203ENST00000615316 3011 ntBASIC17.33■□□□□ 0.37
CDX4O14627 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.33■□□□□ 0.37
CDX4O14627 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDX4O14627 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.33■□□□□ 0.36
CDX4O14627 KRT8P47-201ENST00000604727 1398 ntBASIC17.33■□□□□ 0.36
CDX4O14627 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDX4O14627 AL139400.1-201ENST00000366220 510 ntBASIC17.33■□□□□ 0.36
CDX4O14627 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.33■□□□□ 0.36
CDX4O14627 AC096633.1-201ENST00000422446 749 ntBASIC17.33■□□□□ 0.36
CDX4O14627 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.33■□□□□ 0.36
CDX4O14627 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.33■□□□□ 0.36
CDX4O14627 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.33■□□□□ 0.36
CDX4O14627 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.33■□□□□ 0.36
CDX4O14627 IGHV3-65-201ENST00000523210 341 ntBASIC17.33■□□□□ 0.36
CDX4O14627 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.33■□□□□ 0.36
CDX4O14627 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDX4O14627 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.33■□□□□ 0.36
CDX4O14627 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.33■□□□□ 0.36
CDX4O14627 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.33■□□□□ 0.36
CDX4O14627 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDX4O14627 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDX4O14627 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms