Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN3O00409 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 KRT18P57-201ENST00000443599 1254 ntBASIC19.39■□□□□ 0.69
FOXN3O00409 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXN3O00409 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN3O00409 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN3O00409 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXN3O00409 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 LINC00896-202ENST00000609602 2128 ntBASIC19.39■□□□□ 0.69
FOXN3O00409 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXN3O00409 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXN3O00409 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXN3O00409 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
FOXN3O00409 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXN3O00409 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXN3O00409 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FOXN3O00409 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXN3O00409 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXN3O00409 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXN3O00409 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 AC100803.2-201ENST00000562459 1963 ntBASIC19.38■□□□□ 0.69
FOXN3O00409 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.38■□□□□ 0.69
FOXN3O00409 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.38■□□□□ 0.69
FOXN3O00409 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FOXN3O00409 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN3O00409 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXN3O00409 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXN3O00409 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
FOXN3O00409 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXN3O00409 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 STARP1-201ENST00000397973 869 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 AC092597.1-201ENST00000487352 616 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.37■□□□□ 0.69
FOXN3O00409 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.37■□□□□ 0.69
FOXN3O00409 AC008687.5-201ENST00000593746 558 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
FOXN3O00409 AC024563.2-201ENST00000603282 481 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 AL136038.4-201ENST00000603606 1261 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 LINC01023-201ENST00000606054 436 ntBASIC19.37■□□□□ 0.69
FOXN3O00409 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN3O00409 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
FOXN3O00409 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FOXN3O00409 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN3O00409 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
FOXN3O00409 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
FOXN3O00409 HLA-F-220ENST00000434407 884 ntBASIC19.36■□□□□ 0.69
FOXN3O00409 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN3O00409 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms