Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.08■□□□□ 0.32
CLIC1O00299 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLIC1O00299 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.08■□□□□ 0.32
CLIC1O00299 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC1O00299 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLIC1O00299 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.08■□□□□ 0.32
CLIC1O00299 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLIC1O00299 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.07■□□□□ 0.32
CLIC1O00299 PP12613-201ENST00000424958 2230 ntBASIC17.07■□□□□ 0.32
CLIC1O00299 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.07■□□□□ 0.32
CLIC1O00299 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.07■□□□□ 0.32
CLIC1O00299 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.07■□□□□ 0.32
CLIC1O00299 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CLIC1O00299 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
CLIC1O00299 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLIC1O00299 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CLIC1O00299 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLIC1O00299 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLIC1O00299 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLIC1O00299 AC007663.1-201ENST00000438948 1240 ntBASIC17.06■□□□□ 0.32
CLIC1O00299 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.06■□□□□ 0.32
CLIC1O00299 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.06■□□□□ 0.32
CLIC1O00299 AC116562.4-202ENST00000641738 218 ntBASIC17.06■□□□□ 0.32
CLIC1O00299 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 AC108860.2-201ENST00000562760 2183 ntBASIC17.06■□□□□ 0.32
CLIC1O00299 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLIC1O00299 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLIC1O00299 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
CLIC1O00299 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.06■□□□□ 0.32
CLIC1O00299 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLIC1O00299 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLIC1O00299 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
CLIC1O00299 PRORSD1P-202ENST00000563365 2154 ntBASIC17.05■□□□□ 0.32
CLIC1O00299 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLIC1O00299 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLIC1O00299 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CLIC1O00299 AC141586.5-201ENST00000624546 2050 ntBASIC17.05■□□□□ 0.32
CLIC1O00299 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.05■□□□□ 0.32
CLIC1O00299 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLIC1O00299 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLIC1O00299 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms