Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.72■□□□□ 0.43
TAF4O00268 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.72■□□□□ 0.43
TAF4O00268 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 AC098831.1-202ENST00000438821 336 ntBASIC17.72■□□□□ 0.43
TAF4O00268 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.72■□□□□ 0.43
TAF4O00268 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.72■□□□□ 0.43
TAF4O00268 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.72■□□□□ 0.43
TAF4O00268 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.72■□□□□ 0.43
TAF4O00268 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.72■□□□□ 0.43
TAF4O00268 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.72■□□□□ 0.43
TAF4O00268 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TAF4O00268 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.71■□□□□ 0.43
TAF4O00268 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.43
TAF4O00268 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 RPS8P6-201ENST00000426177 609 ntBASIC17.71■□□□□ 0.43
TAF4O00268 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.71■□□□□ 0.43
TAF4O00268 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.71■□□□□ 0.43
TAF4O00268 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.71■□□□□ 0.43
TAF4O00268 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.71■□□□□ 0.43
TAF4O00268 AC093909.1-201ENST00000504731 1122 ntBASIC17.71■□□□□ 0.43
TAF4O00268 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.71■□□□□ 0.43
TAF4O00268 AC005332.3-201ENST00000589904 676 ntBASIC17.71■□□□□ 0.43
TAF4O00268 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.71■□□□□ 0.43
TAF4O00268 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.71■□□□□ 0.43
TAF4O00268 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.71■□□□□ 0.43
TAF4O00268 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TAF4O00268 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.71■□□□□ 0.43
TAF4O00268 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
TAF4O00268 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.71■□□□□ 0.42
TAF4O00268 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TAF4O00268 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
TAF4O00268 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TAF4O00268 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 ZNF259P1-201ENST00000407656 1365 ntBASIC17.7■□□□□ 0.42
TAF4O00268 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 UPF3AP3-201ENST00000420996 769 ntBASIC17.7■□□□□ 0.42
TAF4O00268 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 AF186996.4-201ENST00000467186 377 ntBASIC17.7■□□□□ 0.42
TAF4O00268 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 AC239800.4-201ENST00000603712 296 ntBASIC17.7■□□□□ 0.42
TAF4O00268 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms