Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX39AO00148 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.33■□□□□ 0.85
DDX39AO00148 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.33■□□□□ 0.85
DDX39AO00148 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.33■□□□□ 0.85
DDX39AO00148 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.33■□□□□ 0.85
DDX39AO00148 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX39AO00148 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX39AO00148 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX39AO00148 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
DDX39AO00148 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX39AO00148 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX39AO00148 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX39AO00148 IGHV3-47-201ENST00000425060 335 ntBASIC20.32■□□□□ 0.84
DDX39AO00148 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX39AO00148 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DDX39AO00148 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX39AO00148 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX39AO00148 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
DDX39AO00148 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
DDX39AO00148 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX39AO00148 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX39AO00148 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 MTCL1P1-201ENST00000446207 792 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 NUS1P1-201ENST00000446295 882 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 MINOS1P3-201ENST00000457048 203 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 UNC93B7-201ENST00000509439 705 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX39AO00148 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.31■□□□□ 0.84
DDX39AO00148 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 AC009154.2-201ENST00000621177 724 ntBASIC20.31■□□□□ 0.84
DDX39AO00148 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX39AO00148 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX39AO00148 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX39AO00148 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DDX39AO00148 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX39AO00148 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX39AO00148 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
DDX39AO00148 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
DDX39AO00148 NUS1P2-201ENST00000417358 873 ntBASIC20.3■□□□□ 0.84
DDX39AO00148 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX39AO00148 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX39AO00148 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX39AO00148 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.3■□□□□ 0.84
DDX39AO00148 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.3■□□□□ 0.84
DDX39AO00148 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX39AO00148 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX39AO00148 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms