Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 MIPEPP3-201ENST00000412105 444 ntBASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 C1QL1P1-201ENST00000568105 661 ntBASIC13.25□□□□□ -0.29
SMKR1H3BMG3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AL121832.2-201ENST00000610979 668 ntBASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AL050303.2-201ENST00000619798 666 ntBASIC13.25□□□□□ -0.29
SMKR1H3BMG3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMKR1H3BMG3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 AL355312.1-201ENST00000407115 2176 ntBASIC13.24□□□□□ -0.29
SMKR1H3BMG3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.24□□□□□ -0.29
SMKR1H3BMG3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 AC091874.3-201ENST00000512672 1195 ntBASIC13.24□□□□□ -0.29
SMKR1H3BMG3 PNMA6B-201ENST00000538162 1200 ntBASIC13.24□□□□□ -0.29
SMKR1H3BMG3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.24□□□□□ -0.29
SMKR1H3BMG3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMKR1H3BMG3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.23□□□□□ -0.29
SMKR1H3BMG3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMKR1H3BMG3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms