Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 CR769767.2-201ENST00000622735 460 ntBASIC18.78■□□□□ 0.6
SRRM3A6NNA2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 AL139384.1-201ENST00000612143 3047 ntBASIC18.78■□□□□ 0.6
SRRM3A6NNA2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRRM3A6NNA2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 MESTP1-201ENST00000404287 994 ntBASIC18.77■□□□□ 0.6
SRRM3A6NNA2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.77■□□□□ 0.6
SRRM3A6NNA2 RN7SL510P-201ENST00000581311 263 ntBASIC18.77■□□□□ 0.6
SRRM3A6NNA2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SRRM3A6NNA2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.77■□□□□ 0.59
SRRM3A6NNA2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRRM3A6NNA2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
SRRM3A6NNA2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRRM3A6NNA2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRRM3A6NNA2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 DGCR10-201ENST00000609839 495 ntBASIC18.76■□□□□ 0.59
SRRM3A6NNA2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SRRM3A6NNA2 HEIH-201ENST00000623091 1652 ntBASIC18.76■□□□□ 0.59
SRRM3A6NNA2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 AC090340.1-201ENST00000620778 4980 ntBASIC18.75■□□□□ 0.59
SRRM3A6NNA2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 AL671277.2-201ENST00000458060 996 ntBASIC18.75■□□□□ 0.59
SRRM3A6NNA2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.75■□□□□ 0.59
SRRM3A6NNA2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms