Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 RNPS1P1-201ENST00000507437 918 ntBASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 AC120114.3-201ENST00000611923 658 ntBASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 AC148477.8-201ENST00000624298 468 ntBASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.84■□□□□ 0.13
MBD3L4A6NDZ8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MBD3L4A6NDZ8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AL590627.1-203ENST00000421194 1026 ntBASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AC093909.1-201ENST00000504731 1122 ntBASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 KRT8P47-201ENST00000604727 1398 ntBASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MBD3L4A6NDZ8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC122714.2-201ENST00000502787 707 ntBASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AL139288.1-201ENST00000623748 933 ntBASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
MBD3L4A6NDZ8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms