Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00862A6NCI5 AC124283.5-201ENST00000624661 1809 ntBASIC14.69□□□□□ -0.06
LINC00862A6NCI5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 AL356740.2-201ENST00000601559 647 ntBASIC14.68□□□□□ -0.06
LINC00862A6NCI5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 TNRC18P2-201ENST00000417666 2714 ntBASIC14.68□□□□□ -0.06
LINC00862A6NCI5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CICP4-201ENST00000447359 2812 ntBASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00862A6NCI5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.67□□□□□ -0.06
LINC00862A6NCI5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 AL358852.1-201ENST00000623174 1268 ntBASIC14.67□□□□□ -0.06
LINC00862A6NCI5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 PHGDH-209ENST00000641074 1780 ntBASIC14.67□□□□□ -0.06
LINC00862A6NCI5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00862A6NCI5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00862A6NCI5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms