Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AC006116.8-202ENST00000587620 1550 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AC098590.1-201ENST00000468126 897 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AP003071.4-201ENST00000562276 1284 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 LINC01126-201ENST00000623515 1646 ntBASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC00959A0A1B0GUT2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 BX088651.1-201ENST00000540551 451 ntBASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AC104390.1-201ENST00000555663 520 ntBASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 MIR3180-4-201ENST00000582223 153 ntBASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AC112497.1-201ENST00000624824 639 ntBASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC00959A0A1B0GUT2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC00959A0A1B0GUT2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms