Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ABHD17AP1-201ENST00000358206 933 ntBASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC233702.5-201ENST00000584107 538 ntBASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 AP001412.1-201ENST00000608405 714 ntBASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF103-CHMP3A0A140T963 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 MCCD1P1-208ENST00000445732 328 ntBASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC097488.1-201ENST00000507834 756 ntBASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 AL049637.2-201ENST00000641778 930 ntBASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF103-CHMP3A0A140T963 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF103-CHMP3A0A140T963 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF103-CHMP3A0A140T963 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 GPAT2P1-201ENST00000444924 1672 ntBASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 MYLKP1-201ENST00000509077 1580 ntBASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC084018.2-201ENST00000613093 2607 ntBASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL023284.2-201ENST00000405850 579 ntBASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF103-CHMP3A0A140T963 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms