Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RCN1P1-201ENST00000400413 996 ntBASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HLA-F-220ENST00000434407 884 ntBASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 MNT-208ENST00000575394 606 ntTSL 4 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 KRT18P55-202ENST00000578578 1546 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 GNAS-203ENST00000306120 1878 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TSPY5P-201ENST00000426936 936 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AL359075.1-203ENST00000462729 1002 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 DUTP2-201ENST00000519164 463 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AC024563.2-201ENST00000603282 481 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 LINC00896-202ENST00000609602 2128 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AC006116.8-202ENST00000587620 1550 ntBASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.99■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RNF152P1-201ENST00000397754 604 ntBASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 AK4P3-201ENST00000418260 669 ntBASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RN7SL850P-201ENST00000579959 291 ntBASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.97■□□□□ 0.15
IGKV1D-43A0A0B4J1Z2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms