Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12□□□□□ -0.49
IGKV2-28A0A075B6P5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC046158.3-201ENST00000624947 2558 ntBASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC092666.2-201ENST00000613287 246 ntBASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 Six3os1_6.1-201ENST00000620790 196 ntBASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
IGKV2-28A0A075B6P5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
IGKV2-28A0A075B6P5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
IGKV2-28A0A075B6P5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC11.97□□□□□ -0.49
IGKV2-28A0A075B6P5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
IGKV2-28A0A075B6P5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms