Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 AL121749.1-202ENST00000609313 2153 ntBASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHB11Q9Y5F2 BX255925.1-201ENST00000566954 1854 ntBASIC24.21■■□□□ 1.47
PCDHB11Q9Y5F2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHB11Q9Y5F2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
PCDHB11Q9Y5F2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHB11Q9Y5F2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.2■■□□□ 1.46
PCDHB11Q9Y5F2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB11Q9Y5F2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDHB11Q9Y5F2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB11Q9Y5F2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHB11Q9Y5F2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB11Q9Y5F2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB11Q9Y5F2 AC126177.7-201ENST00000547904 679 ntBASIC24.18■■□□□ 1.46
PCDHB11Q9Y5F2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB11Q9Y5F2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 AC060814.1-201ENST00000554326 538 ntBASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 AL033527.3-201ENST00000566366 1196 ntBASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB11Q9Y5F2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHB11Q9Y5F2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB11Q9Y5F2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB11Q9Y5F2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB11Q9Y5F2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB11Q9Y5F2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB11Q9Y5F2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
PCDHB11Q9Y5F2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
PCDHB11Q9Y5F2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHB11Q9Y5F2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB11Q9Y5F2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB11Q9Y5F2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB11Q9Y5F2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 U85056.1-201ENST00000616429 682 ntBASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PCDHB11Q9Y5F2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHB11Q9Y5F2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PCDHB11Q9Y5F2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB11Q9Y5F2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB11Q9Y5F2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB11Q9Y5F2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHB11Q9Y5F2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHB11Q9Y5F2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHB11Q9Y5F2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
PCDHB11Q9Y5F2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PCDHB11Q9Y5F2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHB11Q9Y5F2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB11Q9Y5F2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB11Q9Y5F2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PCDHB11Q9Y5F2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB11Q9Y5F2 TSPY13P-201ENST00000338964 914 ntBASIC24.05■■□□□ 1.44
PCDHB11Q9Y5F2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB11Q9Y5F2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB11Q9Y5F2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 ECEL1P2-201ENST00000461596 1295 ntBASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 AC092296.2-201ENST00000589470 999 ntBASIC24.04■■□□□ 1.44
PCDHB11Q9Y5F2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB11Q9Y5F2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms