Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 SUZ12P1-203ENST00000578195 985 ntBASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C12orf4Q9NQ89 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C12orf4Q9NQ89 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
C12orf4Q9NQ89 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
C12orf4Q9NQ89 LINC00273-201ENST00000539813 1452 ntBASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C12orf4Q9NQ89 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C12orf4Q9NQ89 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
C12orf4Q9NQ89 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C12orf4Q9NQ89 MIR6090-201ENST00000622481 60 ntBASIC21.11■□□□□ 0.97
C12orf4Q9NQ89 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.11■□□□□ 0.97
C12orf4Q9NQ89 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
C12orf4Q9NQ89 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
C12orf4Q9NQ89 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
C12orf4Q9NQ89 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
C12orf4Q9NQ89 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
C12orf4Q9NQ89 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
C12orf4Q9NQ89 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
C12orf4Q9NQ89 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
C12orf4Q9NQ89 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.08■□□□□ 0.96
C12orf4Q9NQ89 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
C12orf4Q9NQ89 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.07■□□□□ 0.96
C12orf4Q9NQ89 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 DUX4L28-201ENST00000623687 678 ntBASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
C12orf4Q9NQ89 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf4Q9NQ89 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf4Q9NQ89 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
C12orf4Q9NQ89 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
C12orf4Q9NQ89 CLDN5-201ENST00000403084 2357 ntBASIC21.04■□□□□ 0.96
C12orf4Q9NQ89 LINC00543-201ENST00000567234 1845 ntBASIC21.04■□□□□ 0.96
C12orf4Q9NQ89 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.04■□□□□ 0.96
C12orf4Q9NQ89 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
C12orf4Q9NQ89 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C12orf4Q9NQ89 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
C12orf4Q9NQ89 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 MIR3665-201ENST00000578708 105 ntBASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C12orf4Q9NQ89 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms