Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.06■□□□□ 0.96
GCM1Q9NP62 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GCM1Q9NP62 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.06■□□□□ 0.96
GCM1Q9NP62 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GCM1Q9NP62 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.05■□□□□ 0.96
GCM1Q9NP62 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.05■□□□□ 0.96
GCM1Q9NP62 AC022413.1-201ENST00000624602 984 ntBASIC21.05■□□□□ 0.96
GCM1Q9NP62 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GCM1Q9NP62 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GCM1Q9NP62 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GCM1Q9NP62 GPX1-201ENST00000419349 1106 ntBASIC21.03■□□□□ 0.96
GCM1Q9NP62 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.03■□□□□ 0.96
GCM1Q9NP62 AL359258.2-201ENST00000564063 1566 ntBASIC21.02■□□□□ 0.96
GCM1Q9NP62 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.02■□□□□ 0.96
GCM1Q9NP62 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
GCM1Q9NP62 AC060814.1-201ENST00000554326 538 ntBASIC21.02■□□□□ 0.96
GCM1Q9NP62 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.02■□□□□ 0.96
GCM1Q9NP62 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GCM1Q9NP62 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.01■□□□□ 0.95
GCM1Q9NP62 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.01■□□□□ 0.95
GCM1Q9NP62 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GCM1Q9NP62 WHAMMP3-201ENST00000611636 1609 ntBASIC21■□□□□ 0.95
GCM1Q9NP62 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
GCM1Q9NP62 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21■□□□□ 0.95
GCM1Q9NP62 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21■□□□□ 0.95
GCM1Q9NP62 HSD17B1P1-201ENST00000590052 955 ntBASIC21■□□□□ 0.95
GCM1Q9NP62 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GCM1Q9NP62 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GCM1Q9NP62 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
GCM1Q9NP62 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GCM1Q9NP62 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
GCM1Q9NP62 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCM1Q9NP62 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCM1Q9NP62 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCM1Q9NP62 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.98■□□□□ 0.95
GCM1Q9NP62 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCM1Q9NP62 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.98■□□□□ 0.95
GCM1Q9NP62 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GCM1Q9NP62 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
GCM1Q9NP62 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GCM1Q9NP62 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCM1Q9NP62 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCM1Q9NP62 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCM1Q9NP62 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
GCM1Q9NP62 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCM1Q9NP62 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GCM1Q9NP62 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCM1Q9NP62 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCM1Q9NP62 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.95■□□□□ 0.94
GCM1Q9NP62 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.95■□□□□ 0.94
GCM1Q9NP62 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GCM1Q9NP62 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
GCM1Q9NP62 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.94■□□□□ 0.94
GCM1Q9NP62 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.94■□□□□ 0.94
GCM1Q9NP62 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.94■□□□□ 0.94
GCM1Q9NP62 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GCM1Q9NP62 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GCM1Q9NP62 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GCM1Q9NP62 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GCM1Q9NP62 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GCM1Q9NP62 AC092296.2-201ENST00000589470 999 ntBASIC20.93■□□□□ 0.94
GCM1Q9NP62 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.93■□□□□ 0.94
GCM1Q9NP62 AL449106.1-201ENST00000608517 1980 ntBASIC20.93■□□□□ 0.94
GCM1Q9NP62 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GCM1Q9NP62 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GCM1Q9NP62 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GCM1Q9NP62 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GCM1Q9NP62 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GCM1Q9NP62 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GCM1Q9NP62 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GCM1Q9NP62 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GCM1Q9NP62 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GCM1Q9NP62 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GCM1Q9NP62 RNF126P1-201ENST00000567452 1320 ntBASIC20.91■□□□□ 0.94
GCM1Q9NP62 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 AL157400.5-201ENST00000507624 621 ntBASIC20.9■□□□□ 0.94
GCM1Q9NP62 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GCM1Q9NP62 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GCM1Q9NP62 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GCM1Q9NP62 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GCM1Q9NP62 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
GCM1Q9NP62 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.89■□□□□ 0.93
GCM1Q9NP62 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GCM1Q9NP62 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
GCM1Q9NP62 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GCM1Q9NP62 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GCM1Q9NP62 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.88■□□□□ 0.93
GCM1Q9NP62 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GCM1Q9NP62 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.88■□□□□ 0.93
GCM1Q9NP62 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms