Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRDM13Q9H4Q3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRDM13Q9H4Q3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRDM13Q9H4Q3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.32■□□□□ 0.84
PRDM13Q9H4Q3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM13Q9H4Q3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.32■□□□□ 0.84
PRDM13Q9H4Q3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PRDM13Q9H4Q3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM13Q9H4Q3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM13Q9H4Q3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 AC012354.3-201ENST00000623734 483 ntBASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.29■□□□□ 0.84
PRDM13Q9H4Q3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM13Q9H4Q3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM13Q9H4Q3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM13Q9H4Q3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PRDM13Q9H4Q3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.28■□□□□ 0.84
PRDM13Q9H4Q3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 AL121749.1-202ENST00000609313 2153 ntBASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM13Q9H4Q3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM13Q9H4Q3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.27■□□□□ 0.83
PRDM13Q9H4Q3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 AC100797.4-201ENST00000631653 1827 ntBASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
PRDM13Q9H4Q3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.25■□□□□ 0.83
PRDM13Q9H4Q3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM13Q9H4Q3 U85056.1-201ENST00000616429 682 ntBASIC20.25■□□□□ 0.83
PRDM13Q9H4Q3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRDM13Q9H4Q3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PRDM13Q9H4Q3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM13Q9H4Q3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM13Q9H4Q3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PRDM13Q9H4Q3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM13Q9H4Q3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.23■□□□□ 0.83
PRDM13Q9H4Q3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM13Q9H4Q3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 AL157400.5-201ENST00000507624 621 ntBASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM13Q9H4Q3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM13Q9H4Q3 AC018358.1-201ENST00000631079 1402 ntBASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PRDM13Q9H4Q3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM13Q9H4Q3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM13Q9H4Q3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM13Q9H4Q3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM13Q9H4Q3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRDM13Q9H4Q3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.18■□□□□ 0.82
PRDM13Q9H4Q3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM13Q9H4Q3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms