Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 DUX4L12-201ENST00000614593 1267 ntBASIC21.38■■□□□ 1.01
SEH1LQ96EE3 DUX4L14-201ENST00000621227 1267 ntBASIC21.38■■□□□ 1.01
SEH1LQ96EE3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SEH1LQ96EE3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SEH1LQ96EE3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 AC110285.7-201ENST00000624417 1536 ntBASIC21.37■■□□□ 1.01
SEH1LQ96EE3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 AC018358.1-201ENST00000631079 1402 ntBASIC21.37■■□□□ 1.01
SEH1LQ96EE3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.37■■□□□ 1.01
SEH1LQ96EE3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEH1LQ96EE3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEH1LQ96EE3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SEH1LQ96EE3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SEH1LQ96EE3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SEH1LQ96EE3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.35■■□□□ 1.01
SEH1LQ96EE3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.35■■□□□ 1.01
SEH1LQ96EE3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SEH1LQ96EE3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEH1LQ96EE3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.34■■□□□ 1.01
SEH1LQ96EE3 MIR7108-201ENST00000614319 87 ntBASIC21.34■■□□□ 1.01
SEH1LQ96EE3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.34■■□□□ 1.01
SEH1LQ96EE3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SEH1LQ96EE3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.33■■□□□ 1.01
SEH1LQ96EE3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SEH1LQ96EE3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SEH1LQ96EE3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L13-201ENST00000554103 1267 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L15-201ENST00000611059 1267 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L23-201ENST00000615195 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L24-201ENST00000617576 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L22-201ENST00000618238 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L20-201ENST00000619712 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L21-201ENST00000622058 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L10-201ENST00000622460 1267 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 DUX4L25-201ENST00000624915 1269 ntBASIC21.32■■□□□ 1
SEH1LQ96EE3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.32■■□□□ 1
SEH1LQ96EE3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.31■■□□□ 1
SEH1LQ96EE3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.31■■□□□ 1
SEH1LQ96EE3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.31■■□□□ 1
SEH1LQ96EE3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SEH1LQ96EE3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SEH1LQ96EE3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.3■■□□□ 1
SEH1LQ96EE3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.3■■□□□ 1
SEH1LQ96EE3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.3■■□□□ 1
SEH1LQ96EE3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SEH1LQ96EE3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEH1LQ96EE3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SEH1LQ96EE3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEH1LQ96EE3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SEH1LQ96EE3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SEH1LQ96EE3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.29■■□□□ 1
SEH1LQ96EE3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.28■■□□□ 1
SEH1LQ96EE3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SEH1LQ96EE3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.28■■□□□ 1
SEH1LQ96EE3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.28■■□□□ 1
SEH1LQ96EE3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SEH1LQ96EE3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEH1LQ96EE3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.27■■□□□ 1
SEH1LQ96EE3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SEH1LQ96EE3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.27■■□□□ 1
SEH1LQ96EE3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.27■■□□□ 1
SEH1LQ96EE3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SEH1LQ96EE3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEH1LQ96EE3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEH1LQ96EE3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
SEH1LQ96EE3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
SEH1LQ96EE3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SEH1LQ96EE3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SEH1LQ96EE3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SEH1LQ96EE3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SEH1LQ96EE3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.26■□□□□ 0.99
SEH1LQ96EE3 CR559946.2-201ENST00000623684 991 ntBASIC21.26■□□□□ 0.99
SEH1LQ96EE3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEH1LQ96EE3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SEH1LQ96EE3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
SEH1LQ96EE3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SEH1LQ96EE3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.25■□□□□ 0.99
SEH1LQ96EE3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SEH1LQ96EE3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SEH1LQ96EE3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.24■□□□□ 0.99
SEH1LQ96EE3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SEH1LQ96EE3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SEH1LQ96EE3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
SEH1LQ96EE3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms