Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AC012354.3-201ENST00000623734 483 ntBASIC22.01■■□□□ 1.11
CNEP1R1Q8N9A8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNEP1R1Q8N9A8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CNEP1R1Q8N9A8 AC007029.1-201ENST00000604183 313 ntBASIC22■■□□□ 1.11
CNEP1R1Q8N9A8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CNEP1R1Q8N9A8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.99■■□□□ 1.11
CNEP1R1Q8N9A8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.99■■□□□ 1.11
CNEP1R1Q8N9A8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.99■■□□□ 1.11
CNEP1R1Q8N9A8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CNEP1R1Q8N9A8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CNEP1R1Q8N9A8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CNEP1R1Q8N9A8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CNEP1R1Q8N9A8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNEP1R1Q8N9A8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CNEP1R1Q8N9A8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CNEP1R1Q8N9A8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CNEP1R1Q8N9A8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CNEP1R1Q8N9A8 WHAMMP3-201ENST00000611636 1609 ntBASIC21.95■■□□□ 1.1
CNEP1R1Q8N9A8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNEP1R1Q8N9A8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CNEP1R1Q8N9A8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CNEP1R1Q8N9A8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CNEP1R1Q8N9A8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.94■■□□□ 1.1
CNEP1R1Q8N9A8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.94■■□□□ 1.1
CNEP1R1Q8N9A8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 KRT18P60-201ENST00000312876 1297 ntBASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.93■■□□□ 1.1
CNEP1R1Q8N9A8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNEP1R1Q8N9A8 AC133552.2-201ENST00000619106 1032 ntBASIC21.92■■□□□ 1.1
CNEP1R1Q8N9A8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNEP1R1Q8N9A8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNEP1R1Q8N9A8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNEP1R1Q8N9A8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.91■■□□□ 1.1
CNEP1R1Q8N9A8 AC025884.2-201ENST00000553429 711 ntBASIC21.91■■□□□ 1.1
CNEP1R1Q8N9A8 AL033527.3-201ENST00000566366 1196 ntBASIC21.91■■□□□ 1.1
CNEP1R1Q8N9A8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CNEP1R1Q8N9A8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNEP1R1Q8N9A8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.9■■□□□ 1.1
CNEP1R1Q8N9A8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNEP1R1Q8N9A8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNEP1R1Q8N9A8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 RP9P-202ENST00000450133 1212 ntBASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 AC009831.1-201ENST00000580420 1582 ntBASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CNEP1R1Q8N9A8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 MIR3960-201ENST00000583311 91 ntBASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 AL359504.2-201ENST00000605506 1601 ntBASIC21.88■■□□□ 1.09
CNEP1R1Q8N9A8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 LINC01003-201ENST00000564834 1764 ntBASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 AC093536.1-201ENST00000569153 554 ntBASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.87■■□□□ 1.09
CNEP1R1Q8N9A8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 AL592293.1-201ENST00000502889 1188 ntBASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNEP1R1Q8N9A8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 TSPY13P-201ENST00000338964 914 ntBASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.85■■□□□ 1.09
CNEP1R1Q8N9A8 AC026202.3-201ENST00000600805 1127 ntBASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms