Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LINC00346Q8IVM7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00346Q8IVM7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC00346Q8IVM7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
LINC00346Q8IVM7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00346Q8IVM7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC00346Q8IVM7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LINC00346Q8IVM7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.8■■□□□ 1.08
LINC00346Q8IVM7 AC091060.1-201ENST00000623524 1766 ntBASIC21.79■■□□□ 1.08
LINC00346Q8IVM7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00346Q8IVM7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
LINC00346Q8IVM7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00346Q8IVM7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LINC00346Q8IVM7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 ABHD17AP4-201ENST00000411545 909 ntBASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00346Q8IVM7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00346Q8IVM7 AC142472.1-201ENST00000612013 1741 ntBASIC21.76■■□□□ 1.07
LINC00346Q8IVM7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LINC00346Q8IVM7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.75■■□□□ 1.07
LINC00346Q8IVM7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.75■■□□□ 1.07
LINC00346Q8IVM7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00346Q8IVM7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00346Q8IVM7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00346Q8IVM7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00346Q8IVM7 AC008813.1-201ENST00000536597 885 ntBASIC21.74■■□□□ 1.07
LINC00346Q8IVM7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00346Q8IVM7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00346Q8IVM7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00346Q8IVM7 MIR219A2-201ENST00000608502 1504 ntBASIC21.73■■□□□ 1.07
LINC00346Q8IVM7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 HLA-V-202ENST00000446817 847 ntBASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
LINC00346Q8IVM7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 CR559946.2-201ENST00000623684 991 ntBASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.71■■□□□ 1.07
LINC00346Q8IVM7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINC00346Q8IVM7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00346Q8IVM7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00346Q8IVM7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00346Q8IVM7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00346Q8IVM7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00346Q8IVM7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00346Q8IVM7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00346Q8IVM7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00346Q8IVM7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.69■■□□□ 1.06
LINC00346Q8IVM7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00346Q8IVM7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 AC148477.6-201ENST00000623746 465 ntBASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00346Q8IVM7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC00346Q8IVM7 AC092803.2-201ENST00000564287 1899 ntBASIC21.66■■□□□ 1.06
LINC00346Q8IVM7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00346Q8IVM7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC00346Q8IVM7 AC145676.1-201ENST00000514988 2004 ntBASIC21.66■■□□□ 1.06
LINC00346Q8IVM7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00346Q8IVM7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00346Q8IVM7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms